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ERX12513562: qiita_ptid_16524:15405.BLANK.RISE.6.2H
1 ILLUMINA (Illumina MiSeq) run: 6 spots, 906 bases, 59,898b downloads

Design: 16S sequencing of urine for PLUS rISe Urobiome project
Submitted by: University of California San Diego Microbiome Initiative (University of California San Diego Microbiome Init)
Study: RISE urogenital microbiome sample collection
PRJEB75918 • ERP160469 • All experiments • All runs
show Abstracthide Abstract
A multicentered cohort study designed to evaluate the distribution of women's bladder health and lower urinary tract symptoms (LUTS) and to identify the associated factors with bladder health and LUTS.
Sample: 15405.BLANK.RISE.6.2H
SAMEA115647880 • ERS20100644 • All experiments • All runs
Organism: metagenome
Library:
Name: 15405.BLANK.RISE.6.2H
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: METAGENOMIC
Selection: PCR
Layout: SINGLE
Construction protocol: Illumina EMP protocol 515fbc, 806r amplification of 16S rRNA V4
Experiment attributes: (show all 33 attributes...) (hide...)
barcode: ATATTGGCAGCC
center_name: UCSDMI
center_project_name: PLUS Rise
extraction_robot: HOWE_KF1
extractionkit_lot: not applicable
lane: 1
linker: GT
mastermix_lot: 1320007
old_sample_name: BLANK.RISE.6.2H
orig_name: BLANK.RISE.6.2H
pcr_primers: FWD:GTGYCAGCMGCCGCGGTAA; REV:GGACTACNVGGGTWTCTAAT
plating: JC_LNH_MR
primer: GTGYCAGCMGCCGCGGTAA
primer_date: 7/21/23
primer_plate: 5
processing_robot: Echo550_1
project_name: PLUS_Rise_15405
run_center: UCSDMI
run_date: 2024/02/26
run_prefix: 240226_M05314_0395_000000000-L6PDF_SMPL1_S1_L001
runid: 240226_M05314_0395_000000000-L6PDF
sample_plate: PLUS_Rise_6
sequencing_meth: Sequencing by synthesis
target_gene: 16S rRNA
target_subfragment: V4
tm1000_8_tool: 109379Z
tm10_8_tool: 121507J
tm300_8_tool: not applicable
tm50_8_tool: not applicable
water_lot: 1317793
well_description: PLUS_Rise_6.BLANK.RISE.6.2H.O3
well_id_384: O3
well_id_96: H2
Runs: 1 run, 6 spots, 906 bases, 59,898b
Run# of Spots# of BasesSizePublished
ERR13142060690659,898b2024-07-24

ID:
34110242

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